Information content of long-range NMR data for the characterization of conformational heterogeneity
Articolo
Data di Pubblicazione:
2015
Abstract:
Long-range NMR data, namely residual dipolar
couplings (RDCs) from external alignment and paramagnetic
data, are becoming increasingly popular for the
characterization of conformational heterogeneity of multidomain
biomacromolecules and protein complexes. The
question addressed here is how much information is contained
in these averaged data. We have analyzed and
compared the information content of conformationally
averaged RDCs caused by steric alignment and of both
RDCs and pseudocontact shifts caused by paramagnetic
alignment, and found that, despite the substantial differences,
they contain a similar amount of information. Furthermore,
using several synthetic tests we find that both
sets of data are equally good towards recovering the major
state(s) in conformational distributions.
Tipologia CRIS:
01.01 Articolo in rivista
Keywords:
Paramagnetic NMR; Residual dipolar couplings; Two-domain proteins; Protein mobility; Conformational variability
Elenco autori:
Sgheri, Luca
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