The new scope of virus taxonomy: partitioning the virosphere into 15 hierarchical ranks
Academic Article
Publication Date:
2020
abstract:
Virus taxonomy emerged as a discipline in the middle of the twentieth century. Traditionally, classification by virus taxonomists
has been focussed on the grouping of relatively closely related viruses. However, during the past few years, the International
Committee on Taxonomy of Viruses (ICTV) has recognized that the taxonomy it develops can be usefully extended to include
the basal evolutionary relationships among distantly related viruses. Consequently, the ICTV has changed its Code to allow
a 15-rank classification hierarchy that closely aligns with the Linnaean taxonomic system and may accommodate the entire
spectrum of genetic divergence in the virosphere. The current taxonomies of three human pathogens, Ebola virus, severe acute
respiratory syndrome coronavirus and herpes simplex virus 1 are used to illustrate the impact of the expanded rank structure.
This new rank hierarchy of virus taxonomy will stimulate further research on virus origins and evolution, and vice versa, and
could promote crosstalk with the taxonomies of cellular organisms.
Iris type:
01.01 Articolo in rivista
Keywords:
Comparative genomics; virus evolution; metagenomics; macroevolution; network analyses; phylogenetics; phylogenomics; taxonomy; virus; virosphere
List of contributors:
Rubino, Luisa
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