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Hydration Shell of Antifreeze Proteins: Unveiling the Role of Non-Ice-Binding Surfaces

Academic Article
Publication Date:
2019
abstract:
Antifreeze proteins (AFPs) have the ability to inhibit ice growth by binding to ice nuclei. Their ice-binding mechanism is still unclear, yet the hydration layer is thought to play a fundamental role. Here, we use molecular dynamics simulations to characterize the hydration shell of two AFPs and two non-AFPs. The calculated shell thickness and density of the AFPs do not feature any relevant difference with respect to the non-AFPs. Moreover, the hydration shell density is always higher than the bulk density and, thus, no low-density, ice-like layer is detected at the ice-binding surface (IBS) of AFPs. Instead, we observe local water-density differences in AFPs between the IBS (lower density) and the non-IBS (higher density). The lower solvent density at the ice-binding site can pave the way to the protein binding to ice nuclei, while the higher solvent density at the non-ice-binding surfaces might provide protection against ice growth.
Iris type:
01.01 Articolo in rivista
Keywords:
Molecular dynamics simulations; Hydration shell; Antifreeze protein; Ice binding surfaces; Solvent density
List of contributors:
DEL GALDO, Sara; ZANETTI POLZI, Laura
Authors of the University:
ZANETTI POLZI LAURA
Handle:
https://iris.cnr.it/handle/20.500.14243/420143
Published in:
JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL
Journal
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http://www.scopus.com/record/display.url?eid=2-s2.0-85070848316&origin=inward
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