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A deep learning approach to DNA sequence classification: first results

Conference Paper
Publication Date:
2015
abstract:
Deep learning neural networks are capable to extract significant features from raw data, and to use these features for classification tasks. In this work we present a deep learning neural network for DNA sequence classification based on spectral sequence representation. The framework is tested on a dataset of 3000 16S genes and compared to the GRNN that we tested outperform the Support Vector Machine classification algorithm.
Iris type:
04.01 Contributo in Atti di convegno
Keywords:
Convolutional Network; Deep Learning; Artificial Neural Network; Spectral Sequence Representation; K-mers representation
List of contributors:
Rizzo, Riccardo; Urso, Alfonso; Fiannaca, Antonino; LA ROSA, Massimo
Authors of the University:
FIANNACA ANTONINO
LA ROSA MASSIMO
RIZZO RICCARDO
URSO ALFONSO
Handle:
https://iris.cnr.it/handle/20.500.14243/302587
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