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ITSoneWB: profiling global taxonomic diversity of eukaryotic communities on Galaxy

Articolo
Data di Pubblicazione:
2021
Abstract:
Summary: ITSoneWB (ITSone WorkBench) is a Galaxy-based bioinformatic environment where comprehensive and high-quality reference data are connected with established pipelines and new tools in an automated and easy-to-use service targeted at global taxonomic analysis of eukaryotic communities based on Internal Transcribed Spacer 1 var- iants high-throughput sequencing. Availability and implementation: ITSoneWB has been deployed on the INFN-Bari ReCaS cloud facility and is freely available on the web at http://itsonewb.cloud.ba.infn.it/galaxy. Contact: m.santamaria@ibiom.cnr.it Supplementary information: Supplementary data are available at Bioinformatics online.
Tipologia CRIS:
01.01 Articolo in rivista
Keywords:
Galaxy; Bioinformatics; Workbench; DNA barcoding; Eukaryotic communities
Elenco autori:
Pesole, Graziano; Licciulli, VITO FLAVIO; Grillo, Giorgio; Santamaria, Monica; Fosso, Bruno
Autori di Ateneo:
FOSSO BRUNO
GRILLO GIORGIO
LICCIULLI VITO FLAVIO
PESOLE GRAZIANO
SANTAMARIA MONICA
Link alla scheda completa:
https://iris.cnr.it/handle/20.500.14243/398808
Pubblicato in:
BIOINFORMATICS (OXF., PRINT)
Journal
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