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Matching models across abstraction levels with Gaussian processes

Conference Paper
Publication Date:
2016
abstract:
Biological systems are often modelled at different levels of abstraction depending on the particular aims/resources of a study. Such different models often provide qualitatively concordant predictions over specific parametrisations, but it is generally unclear whether model predictions are quantitatively in agreement, and whether such agreement holds for different parametrisations. Here we present a generally applicable statistical machine learning methodology to automatically reconcile the predictions of different models across abstraction levels. Our approach is based on defining a correction map, a random function which modifies the output of a model in order to match the statistics of the output of a different model of the same system. We use two biological examples to give a proof-of-principle demonstration of the methodology, and discuss its advantages and potential further applications.
Iris type:
04.01 Contributo in Atti di convegno
Keywords:
Computational abstraction; EmulationGaussian Processes; Heteroschedasticity
List of contributors:
Bortolussi, Luca
Handle:
https://iris.cnr.it/handle/20.500.14243/409534
Full Text:
https://iris.cnr.it//retrieve/handle/20.500.14243/409534/102256/prod_424316-doc_157719.pdf
Book title:
Computational Methods in Systems Biology. CMSB 2016. Lecture Notes in Computer Science
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URL

https://link.springer.com/chapter/10.1007/978-3-319-45177-0_4
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