The effect of anions on azide binding to myoglobin: an unusual functional modulation
Academic Article
Publication Date:
2002
abstract:
The effect of increasing concentrations of several anions on the azide (N3
3 ) binding properties of sperm whale and horse
ferric myoglobin has been studied. Surprisingly, a number of anions may act as heterotropic effectors, decreasing the affinity
of myoglobins for N3
3 , in the following order: ClO3
4 =I3 sBr3 sCl3 and SO23
4 , which mirrors the increase in their charge
density. The largest effects were measured using ClO3
4 and I3, which produce a 4-fold and 8-fold reduction of the N3
3 binding
affinity in horse and sperm whale myoglobins, respectively. A dissociation equilibrium constant (Kd) ranging from 150 to 250
mM was estimated for ClO3
4 and I3 binding to myoglobins. In order to analyse the molecular mechanism producing the
reduction of the N3
3 binding affinity to ferric myoglobin, the potential anionic binding sites within ferric myoglobin were
investigated by a molecular modelling study using the program Grid. Analysis of the theoretical results suggests two
particularly favourable binding sites: the first, next to the distal side of the haem, whose occupancy might alter the
electrostatic potential surrounding the bound N3
3 ; the second, involving residues of helices B and G which are far from the
haem iron atom, thus implying a long range effect on the bound N3
3 . Based on the evidence that no significant
conformational changes are found in the three-dimensional structures of N3
3 -free and N3
3 -bound myoglobin and on previous
results on N3
3 binding to ferric myoglobin mutants in CD3 positions, we favour the first hypothesis, suggesting that the
functional heterotropic modulation of monomeric myoglobin is mainly depending on a decrease of the positive charge
density induced by the binding of anions to the haem distal side.
Iris type:
01.01 Articolo in rivista
Keywords:
mioglobina; ligandi eterotropici; allosteria; molecular modeling; docking molecolare
List of contributors:
Giardina, Bruno; Brancaccio, Andrea; DE ROSA, MARIA CRISTINA
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