Factors Impacting sigma-and p-Hole Regions as Revealed by the Electrostatic Potential and Its Source Function Reconstruction: The Case of 4,4'-Bipyridine Derivatives
Academic Article
Publication Date:
2020
abstract:
Positive electrostatic potential (V) values are often associated with sigma- and p-holes, regions
of lower electron density which can interact with electron-rich sites to form noncovalent interactions.
Factors impacting sigma- and p-holes may thus be monitored in terms of the shape and values of the
resulting V. Further precious insights into such factors are obtained through a rigorous decomposition
of the V values in atomic or atomic group contributions, a task here achieved by extending the
Bader-Gatti source function (SF) for the electron density to V. In this article, this general methodology
is applied to a series of 4,4'-bipyridine derivatives containing atoms from Groups VI (S, Se) and VII
(Cl, Br), and the pentafluorophenyl group acting as a p-hole. As these molecules are characterized
by a certain degree of conformational freedom due to the possibility of rotation around the two
C-Ch bonds, from two to four conformational motifs could be identified for each structure through
conformational search. On this basis, the impact of chemical and conformational features on sigma- and
p-hole regions could be systematically evaluated by computing the V values on electron density
isosurfaces (VS) and by comparing and dissecting in atomic/atomic group contributions the VS
maxima (VS,max) values calculated for different molecular patterns. The results of this study confirm
that both chemical and conformational features may seriously impact sigma- and p-hole regions and
provide a clear analysis and a rationale of why and how this influence is realized. Hence, the proposed
methodology might offer precious clues for designing changes in the sigma- and p-hole regions, aimed at
affecting their potential involvement in noncovalent interactions in a desired way.
Iris type:
01.01 Articolo in rivista
Keywords:
atomic group contributions; bipyridines; chalcogen bond; electrostatic potential; halogen bond; source function
List of contributors:
Dallocchio, ROBERTO NICO; Dessi', Alessandro; Gatti, CARLO EDOARDO; Peluso, Paola
Published in: